[ { "@graph" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48", "@type" : [ "http://www.nanopub.org/nschema#Nanopublication" ], "http://www.nanopub.org/nschema#hasAssertion" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#assertion" } ], "http://www.nanopub.org/nschema#hasProvenance" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#pubinfo" } ] } ], "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#Head" }, { "@graph" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#assertion", "@type" : [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://purl.org/dc/terms/description" : [ { "@value" : "Such a nanopublication expresses an association between two organism taxons (a subject taxon and an object taxon), for example expressing that the organisms of the subject taxon prey on organisms of the object taxon." } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Expressing an association between two organism taxons" } ], "https://w3id.org/np/o/ntemplate/hasStatement" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st0" }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st1" }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st2" }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st3" }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st4" }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st5" } ], "https://w3id.org/np/o/ntemplate/hasTag" : [ { "@value" : "Biodiversity" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#association", "@type" : [ "https://w3id.org/np/o/ntemplate/IntroducedResource", "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "this association" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#objlifecyclestage", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the life cycle stage of the object taxon" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://www.ebi.ac.uk/ols/api/select?ontology=uberon&fieldList=iri,label,description&childrenOf=http://purl.obolibrary.org/obo/UBERON_0000105&q=" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#objtaxon", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the object taxon, e.g. a species" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://vodex.petapico.org/nidx/query?rows=100&q=label:" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#relation", "@type" : [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the type of relation between the two taxons" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom" : [ { "@id" : "http://purl.org/np/RAodaWZBY-yDEtl9reYazBfI-YVD5L4zPh8RrVFS0kbEo" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st0", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#association" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st1", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#subjtaxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/subject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#association" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st2", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#subjlifecyclestage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#association" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st3", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#relation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/predicate" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#association" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st4", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#objtaxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/object" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#association" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#st5", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#objlifecyclestage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#association" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#subjlifecyclestage", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the life cycle stage of the subject taxon" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://www.ebi.ac.uk/ols/api/select?ontology=uberon&fieldList=iri,label,description&childrenOf=http://purl.obolibrary.org/obo/UBERON_0000105&q=" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#subjtaxon", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the subject taxon, e.g. a species" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://vodex.petapico.org/nidx/query?rows=100&q=label:" } ] }, { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is a" } ] }, { "@id" : "https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "association of an organism taxon to another organism taxon" } ] }, { "@id" : "https://w3id.org/biolink/vocab/object", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the object taxon" } ] }, { "@id" : "https://w3id.org/biolink/vocab/predicate", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the relation (between subject taxon and object taxon)" } ] }, { "@id" : "https://w3id.org/biolink/vocab/subject", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the subject taxon" } ] }, { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the object taxon's life cycle stage" } ] }, { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the subject taxon's life cycle stage" } ] } ], "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#assertion" }, { "@graph" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#assertion", "http://www.w3.org/ns/prov#wasAttributedTo" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234" } ] } ], "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#provenance" }, { "@graph" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48", "http://purl.org/dc/terms/created" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#dateTime", "@value" : "2023-04-26T11:38:29.512Z" } ], "http://purl.org/dc/terms/creator" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234" } ], "http://purl.org/nanopub/x/supersedes" : [ { "@id" : "http://purl.org/np/RAlNA_JA3LqLjgNwi0ysIb2nSkSLdy3gNfYOwu58N3aJ0" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate" : [ { "@id" : "http://purl.org/np/RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate" : [ { "@id" : "http://purl.org/np/RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM" }, { "@id" : "http://purl.org/np/RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate" : [ { "@id" : "http://purl.org/np/RAkONP_jLqAbok3FgtutnKcLs4IHr9KiAuslQNnfEJIwY" } ] }, { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#sig", "http://purl.org/nanopub/x/hasAlgorithm" : [ { "@value" : "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey" : [ { "@value" : "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCjDGQCS1S+SRnERDuYDXOugdYUP0efEquHJEEHAbU/uLzBVlga89zqrNPCS7fBE6lArBUWEmT8eLKdMapyqvAzI1J3jUWTMhDJF+XFBkUiuiFfNSc4vJJcmi0yujtnuzXsRIG202jyaP4f5ULoskFwaZOSBZJfiE0dsB3D7DTIAQIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature" : [ { "@value" : "lxge9rLxCYrA99uykveU9ZWqWi/JCoK6YOQqZjqrJ1cIdk8JFqm+j5nBMXAQ8cf9OMIS+TXZOWK1uU/nWppCYlFCtrFmC/gfKoX2nAHMXsF+Wp/5lJfXmTxLhXxHgfWrHx5gil2mf0GwOjFH5t42wkQ/ffUwPpqwhpCQW9eOnU0=" } ], "http://purl.org/nanopub/x/hasSignatureTarget" : [ { "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48" } ] } ], "@id" : "http://purl.org/np/RAfkBEHGmvTphfKcesMTreOcXTekxZmf3iO50SXoRBX48#pubinfo" } ]