@prefix this: <https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs> .
@prefix sub: <https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix ns1: <http://purl.org/np/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .

sub:Head {
  this: np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo;
    a np:Nanopublication .
}

sub:assertion {
  rdf:type rdfs:label "is an" .
  
  rdfs:comment rdfs:label "has the free-text comment" .
  
  <https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation> rdfs:label
      "association between two organism taxa" .
  
  <https://w3id.org/biolink/vocab/object> rdfs:label "refers to - links an association to its object" .
  
  <https://w3id.org/biolink/vocab/predicate> rdfs:label "refers to the relation (between subject taxon and object taxon)" .
  
  <https://w3id.org/biolink/vocab/subject> rdfs:label "refers to - links an association to its subject" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage> rdfs:label "refers to the object taxon's life cycle stage" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage> rdfs:label "refers to the subject taxon's life cycle stage" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition> rdfs:label "is used as defined in" .
  
  <https://w3id.org/kpxl/biodiv/terms/hasTaxonName> rdfs:label "has the name - links a taxon usage to a taxon name" .
  
  sub:assertion dct:description """<p>Such a nanopublication expresses an association between classes of organisms (taxa), a subject taxon and an object taxon, for example expressing that the organisms of the subject taxon prey on organisms of the object taxon.</p>

<p>For expressing observations of interactions between individual organisms, please use the alternative template \"Associations between organisms\".</p>""";
    a nt:AssertionTemplate;
    rdfs:label "Expressing an association between two organism taxa";
    nt:hasDefaultProvenance ns1:RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s;
    nt:hasNanopubLabelPattern "${subjtaxonname} - ${relation} - ${objtaxonname}";
    nt:hasStatement sub:st00, sub:st05, sub:st10, sub:st11, sub:st12, sub:st20, sub:st40,
      sub:st41, sub:st42, sub:st50, sub:st60;
    nt:hasTag "Biodiversity";
    nt:hasTargetNanopubType <https://w3id.org/kpxl/biodiv/terms/BiodivNanopub> .
  
  sub:association a nt:IntroducedResource, nt:LocalResource;
    rdfs:label "this association" .
  
  sub:comment a nt:LongLiteralPlaceholder;
    rdfs:label "short explanation related to the above statement" .
  
  sub:objlifecyclestage a nt:RestrictedChoicePlaceholder;
    rdfs:label "the life cycle stage of the object taxon";
    nt:possibleValuesFrom ns1:RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE .
  
  sub:objtaxon a nt:LocalResource;
    rdfs:label "the object taxon concept" .
  
  sub:objtaxondef a nt:ExternalUriPlaceholder;
    rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)";
    nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
  
  sub:objtaxonname a nt:GuidedChoicePlaceholder;
    rdfs:label "search and select from list (if not found, you may paste URL from IPNI, MycoBank, Index Fungorum, or ZooBank)";
    nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
  
  sub:relation a nt:RestrictedChoicePlaceholder;
    rdfs:label "the type of relation between the two taxa";
    nt:possibleValuesFrom <https://w3id.org/np/RAQUHrC3sP4AYu7i7pt-eVOMnyUtwi2P8LVZDWxhffEAI> .
  
  sub:st00 rdf:object <https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation>;
    rdf:predicate rdf:type;
    rdf:subject sub:association .
  
  sub:st05 rdf:object sub:relation;
    rdf:predicate <https://w3id.org/biolink/vocab/predicate>;
    rdf:subject sub:association .
  
  sub:st10 rdf:object sub:subjtaxon;
    rdf:predicate <https://w3id.org/biolink/vocab/subject>;
    rdf:subject sub:association .
  
  sub:st11 rdf:object sub:subjtaxonname;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
    rdf:subject sub:subjtaxon .
  
  sub:st12 rdf:object sub:subjtaxondef;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
    rdf:subject sub:subjtaxon;
    a nt:OptionalStatement .
  
  sub:st20 rdf:object sub:subjlifecyclestage;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage>;
    rdf:subject sub:association;
    a nt:OptionalStatement .
  
  sub:st40 rdf:object sub:objtaxon;
    rdf:predicate <https://w3id.org/biolink/vocab/object>;
    rdf:subject sub:association .
  
  sub:st41 rdf:object sub:objtaxonname;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonName>;
    rdf:subject sub:objtaxon .
  
  sub:st42 rdf:object sub:objtaxondef;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>;
    rdf:subject sub:objtaxon;
    a nt:OptionalStatement .
  
  sub:st50 rdf:object sub:objlifecyclestage;
    rdf:predicate <https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage>;
    rdf:subject sub:association;
    a nt:OptionalStatement .
  
  sub:st60 rdf:object sub:comment;
    rdf:predicate rdfs:comment;
    rdf:subject sub:association;
    a nt:OptionalStatement .
  
  sub:subjlifecyclestage a nt:RestrictedChoicePlaceholder;
    rdfs:label "the life cycle stage of the subject taxon";
    nt:possibleValuesFrom ns1:RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE .
  
  sub:subjtaxon a nt:LocalResource;
    rdfs:label "the subject taxon concept" .
  
  sub:subjtaxondef a nt:ExternalUriPlaceholder;
    rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)";
    nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
  
  sub:subjtaxonname a nt:GuidedChoicePlaceholder;
    rdfs:label "search and select from list (if not found, paste identifying URI from IPNI, MycoBank, Index Fungorum, or Zoobank)";
    nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}

sub:pubinfo {
  orcid:0000-0002-1267-0234 foaf:name "Tobias Kuhn" .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCjDGQCS1S+SRnERDuYDXOugdYUP0efEquHJEEHAbU/uLzBVlga89zqrNPCS7fBE6lArBUWEmT8eLKdMapyqvAzI1J3jUWTMhDJF+XFBkUiuiFfNSc4vJJcmi0yujtnuzXsRIG202jyaP4f5ULoskFwaZOSBZJfiE0dsB3D7DTIAQIDAQAB";
    npx:hasSignature "ZZ2ovpSc1Ufoq5AmkEIFInROhatgQZTYdqnOijiiUz0uJJL18nM4H/jIIknZZKqb7szptl35Co7g4I0T//BQDC4dQ7FJBFGTGE+8kGdB20orkOp5ce+6o0j4LzR+PdoxJN5xX5izrj7fxYMvCcI+wQioxpriXZvO8nmuruNM4L4=";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0000-0002-1267-0234 .
  
  this: dct:created "2024-03-19T10:07:19.795Z"^^xsd:dateTime;
    dct:creator orcid:0000-0002-1267-0234;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:supersedes ns1:RAh16oLqLJKo8I8R2CebR1n8Dwv95KL_H-azFfGt2FGW0;
    npx:wasCreatedAt <https://nanodash.petapico.org/>;
    rdfs:label "Template: Expressing an association between two organism taxa";
    nt:wasCreatedFromProvenanceTemplate ns1:RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM;
    nt:wasCreatedFromPubinfoTemplate ns1:RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM,
      ns1:RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90, ns1:RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI;
    nt:wasCreatedFromTemplate ns1:RAJwu5sVubRqXY4t2gkSoGxWkMyZqnpkGTCPiTlmvi4so .
}