[ { "@graph" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs", "@type" : [ "http://www.nanopub.org/nschema#Nanopublication" ], "http://www.nanopub.org/nschema#hasAssertion" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#assertion" } ], "http://www.nanopub.org/nschema#hasProvenance" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#pubinfo" } ] } ], "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#Head" }, { "@graph" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is an" } ] }, { "@id" : "http://www.w3.org/2000/01/rdf-schema#comment", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has the free-text comment" } ] }, { "@id" : "https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "association between two organism taxa" } ] }, { "@id" : "https://w3id.org/biolink/vocab/object", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to - links an association to its object" } ] }, { "@id" : "https://w3id.org/biolink/vocab/predicate", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the relation (between subject taxon and object taxon)" } ] }, { "@id" : "https://w3id.org/biolink/vocab/subject", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to - links an association to its subject" } ] }, { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the object taxon's life cycle stage" } ] }, { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "refers to the subject taxon's life cycle stage" } ] }, { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is used as defined in" } ] }, { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonName", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has the name - links a taxon usage to a taxon name" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#assertion", "@type" : [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://purl.org/dc/terms/description" : [ { "@value" : "

Such a nanopublication expresses an association between classes of organisms (taxa), a subject taxon and an object taxon, for example expressing that the organisms of the subject taxon prey on organisms of the object taxon.

\r\n\r\n

For expressing observations of interactions between individual organisms, please use the alternative template \"Associations between organisms\".

" } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Expressing an association between two organism taxa" } ], "https://w3id.org/np/o/ntemplate/hasDefaultProvenance" : [ { "@id" : "http://purl.org/np/RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern" : [ { "@value" : "${subjtaxonname} - ${relation} - ${objtaxonname}" } ], "https://w3id.org/np/o/ntemplate/hasStatement" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st00" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st05" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st10" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st11" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st12" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st20" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st40" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st41" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st42" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st50" }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st60" } ], "https://w3id.org/np/o/ntemplate/hasTag" : [ { "@value" : "Biodiversity" } ], "https://w3id.org/np/o/ntemplate/hasTargetNanopubType" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/BiodivNanopub" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association", "@type" : [ "https://w3id.org/np/o/ntemplate/IntroducedResource", "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "this association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#comment", "@type" : [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "short explanation related to the above statement" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objlifecyclestage", "@type" : [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the life cycle stage of the object taxon" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom" : [ { "@id" : "http://purl.org/np/RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxon", "@type" : [ "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the object taxon concept" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxondef", "@type" : [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)" } ], "https://w3id.org/np/o/ntemplate/hasRegex" : [ { "@value" : "(https://doi.org/|https://treatment.plazi.org/id/).+" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxonname", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "search and select from list (if not found, you may paste URL from IPNI, MycoBank, Index Fungorum, or ZooBank)" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://vodex.petapico.org/nidx/query?rows=100&q=label:" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#relation", "@type" : [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the type of relation between the two taxa" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom" : [ { "@id" : "https://w3id.org/np/RAQUHrC3sP4AYu7i7pt-eVOMnyUtwi2P8LVZDWxhffEAI" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st00", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st05", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#relation" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/predicate" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st10", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/subject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st11", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxonname" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonName" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxon" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st12", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxondef" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxon" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st20", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjlifecyclestage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st40", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/object" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st41", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxonname" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonName" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxon" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st42", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxondef" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objtaxon" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st50", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#objlifecyclestage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#st60", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#comment" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/2000/01/rdf-schema#comment" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#association" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjlifecyclestage", "@type" : [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the life cycle stage of the subject taxon" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom" : [ { "@id" : "http://purl.org/np/RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxon", "@type" : [ "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the subject taxon concept" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxondef", "@type" : [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)" } ], "https://w3id.org/np/o/ntemplate/hasRegex" : [ { "@value" : "(https://doi.org/|https://treatment.plazi.org/id/).+" } ] }, { "@id" : "https://w3id.org/np/RAThWJjWZQM4c1voesyeV-ID20eoTKbiM6h9t0DXsuTLs#subjtaxonname", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "search and select from list (if not found, paste identifying URI from IPNI, 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