[ { "@graph" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc", "@type" : [ "http://www.nanopub.org/nschema#Nanopublication" ], "http://www.nanopub.org/nschema#hasAssertion" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#assertion" } ], "http://www.nanopub.org/nschema#hasProvenance" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#pubinfo" } ] } ], "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#Head" }, { "@graph" : [ { "@id" : "http://purl.obolibrary.org/obo/ECO_0000006", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "experimental evidence" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000180", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "clinical study evidence" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000204", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "author statement" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000205", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "curator inference" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000362", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "computational inference" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0005548", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "biological system reconstruction evidence based on inference from background scientific knowledge" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0006152", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "medical practitioner statement evidence" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0006153", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "self-reported individual's statement evidence" } ] }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0007672", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "computational evidence" } ] }, { "@id" : "http://purl.obolibrary.org/obo/SEPIO_0000145", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "was quoted from" } ] }, { "@id" : "http://purl.obolibrary.org/obo/SEPIO_0000398", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has evidence type (ECO code)" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#assertion", "@type" : [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Adding evidences to an existing nanopublication" } ], "https://w3id.org/np/o/ntemplate/hasStatement" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st00" }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st01" }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st02" }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st03" }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st04" }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st05" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence", "@type" : [ "https://w3id.org/np/o/ntemplate/LocalResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "This evidence" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidencedescription", "@type" : [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "provide a human-readable description of the evidence here, and how it supports or disputes the association" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidencetype", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "add the evidence code from the evidence code ontology here" } ], "https://w3id.org/np/o/ntemplate/possibleValue" : [ { "@id" : "http://purl.obolibrary.org/obo/ECO_0000000" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000006" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000180" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000204" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000205" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0000362" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0005548" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0006152" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0006153" }, { "@id" : "http://purl.obolibrary.org/obo/ECO_0007672" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "http://data.bioontology.org/search?pagesize=20&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&ontologies=ECO&q=" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidenceuri", "@type" : [ "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "add the URL to the source of the evidence here (e.g. DailyMed publication)" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#nanopubassertion", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "search the nanopublication to add an evidence to" } ], "https://w3id.org/np/o/ntemplate/getPossibleValuesFromNanopubApi" : [ { "@value" : "http://purl.org/nanopub/api/find_signed_nanopubs_with_text?text=" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st00", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/has_evidence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#nanopubassertion" } ], "https://w3id.org/np/o/ntemplate/statementOrder" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#integer", "@value" : "0" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st01", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidenceuri" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://purl.obolibrary.org/obo/SEPIO_0000145" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence" } ], "https://w3id.org/np/o/ntemplate/statementOrder" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#integer", "@value" : "1" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st02", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidencedescription" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/description" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence" } ], "https://w3id.org/np/o/ntemplate/statementOrder" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#integer", "@value" : "2" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st03", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidencetype" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://purl.obolibrary.org/obo/SEPIO_0000398" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence" } ], "https://w3id.org/np/o/ntemplate/statementOrder" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#integer", "@value" : "3" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st04", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "https://w3id.org/biolink/vocab/id" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence" } ], "https://w3id.org/np/o/ntemplate/statementOrder" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#integer", "@value" : "4" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#st05", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/biolink/vocab/EvidenceType" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#evidence" } ], "https://w3id.org/np/o/ntemplate/statementOrder" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#integer", "@value" : "5" } ] }, { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is a" } ] }, { "@id" : "http://www.w3.org/2000/01/rdf-schema#label", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "asserts that" } ] }, { "@id" : "http://www.w3.org/ns/prov#wasQuotedFrom", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "was quoted from" } ] }, { "@id" : "https://w3id.org/biolink/vocab/EvidenceType", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Evidence" } ] }, { "@id" : "https://w3id.org/biolink/vocab/category", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has type of evidence" } ] }, { "@id" : "https://w3id.org/biolink/vocab/description", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is described by" } ] }, { "@id" : "https://w3id.org/biolink/vocab/has_evidence", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has evidence" } ] }, { "@id" : "https://w3id.org/biolink/vocab/id", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has id" } ] }, { "@id" : "https://w3id.org/dao/dao#context", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has context" } ] } ], "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#assertion" }, { "@graph" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#assertion", "http://www.w3.org/ns/prov#wasAttributedTo" : [ { "@id" : "https://orcid.org/0000-0003-4727-9435" } ] } ], "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#provenance" }, { "@graph" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc", "http://purl.org/dc/terms/created" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#dateTime", "@value" : "2020-09-08T10:00:00+01:00" } ], "http://purl.org/dc/terms/creator" : [ { "@id" : "https://orcid.org/0000-0003-4727-9435" } ], "http://purl.org/nanopub/x/supersedes" : [ { "@id" : "http://purl.org/np/RAw060mrhuQ6CrJ7O1U879YcykIdF-nNv_x1sJ0-hi8Nw" } ] }, { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#sig", "http://purl.org/nanopub/x/hasAlgorithm" : [ { "@value" : "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey" : [ { "@value" : "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCR9fz0fKCdWOWC+pxhkQhEM/ppbdIYe5TLSdj+lJzSlv9mYBaPgrzVezSwwbmhlHBPDZa4/vHycU315BdmUGq+pXllp9+rWFfrb+kBJwhZjpG6BeyyXBsRFz4jmQVxl/ZYHilQTh/XalYzKkEAyTiEMPee4Kz61PaWOKH24CsnOQIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature" : [ { "@value" : "G1hwCeO41qMr33o0071P4DJ1T1gyKWho8r3IRzisnJSgRn7bb1hpyhaZf+BckwezgsEq42Gab5HnJbKcDhORbvUVQ2J8E0yz+Xq1Xljx4SJK0lvMUlRbBvpObp0ydf4yhn4kw1C82YBbla+P6vrKAD+P5SGqOfsqzeXqOQCMIS8=" } ], "http://purl.org/nanopub/x/hasSignatureTarget" : [ { "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc" } ] } ], "@id" : "http://purl.org/np/RASec0T6GBrm__wXJ6_P90kG5F_usIAaB8plL7yDaf-uc#pubinfo" } ]