sub:assertion {
<
http://purl.obolibrary.org/obo/RO_0001019>
rdfs:label "contains" .
sub:assertion dct:description "Such a nanopublication expresses an association between an organism taxon (e.g. a species) and a gene." ;
a nt:AssertionTemplate ;
rdfs:label "Expressing an association between an organism taxon and a gene" ;
nt:hasStatement sub:st0 ,
sub:st1 ,
sub:st2 ,
sub:st3 ,
sub:st4 ;
nt:hasTag "Biodiversity" .
sub:association a nt:IntroducedResource ,
nt:LocalResource ;
rdfs:label "this association" .
sub:gene a nt:GuidedChoicePlaceholder ;
rdfs:label "the gene to be associated with the taxon" ;
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=ogg&fieldList=iri,label,description&q=" .
sub:lifecyclestage a nt:GuidedChoicePlaceholder ;
rdfs:label "the life cycle stage" ;
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=uberon&fieldList=iri,label,description&childrenOf=http://purl.obolibrary.org/obo/UBERON_0000105&q=" .
sub:relation a nt:GuidedChoicePlaceholder ;
rdfs:label "the type of relation between the taxon and the gene" ;
nt:possibleValue <
http://purl.obolibrary.org/obo/RO_0001019> ;
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=ro&fieldList=iri,label,description&q=" .
sub:st0 rdf:object <
https://w3id.org/kpxl/biodiv/terms/OrganismTaxonToGeneAssociation> ;
rdf:predicate rdf:type ;
rdf:subject sub:association .
sub:st1 rdf:object sub:taxon ;
rdf:predicate <
https://w3id.org/biolink/vocab/subject> ;
rdf:subject sub:association .
sub:st2 rdf:object sub:lifecyclestage ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage> ;
rdf:subject sub:association ;
a nt:OptionalStatement .
sub:st3 rdf:object sub:relation ;
rdf:predicate <
https://w3id.org/biolink/vocab/predicate> ;
rdf:subject sub:association .
sub:st4 rdf:object sub:gene ;
rdf:predicate <
https://w3id.org/biolink/vocab/object> ;
rdf:subject sub:association .
sub:taxon a nt:GuidedChoicePlaceholder ;
rdfs:label "the organism taxon, e.g. a species" ;
nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
rdf:type rdfs:label "is a" .
<
https://w3id.org/biolink/vocab/object>
rdfs:label "refers to the gene" .
<
https://w3id.org/biolink/vocab/predicate>
rdfs:label "refers to the relation (between taxon and gene)" .
<
https://w3id.org/biolink/vocab/subject>
rdfs:label "refers to the organism taxon" .
<
https://w3id.org/kpxl/biodiv/terms/OrganismTaxonToGeneAssociation>
rdfs:label "association of an organism taxon to an environment" .
<
https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage>
rdfs:label "refers to the taxon's life cycle stage" .
}